Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs17583995 chr2:118719302 T/C 1.6E-5 178 25.17 30.93 11.65 KM Plot
PCPG rs17584023 chr2:118720852 C/G 1.6E-5 178 25.17 30.93 11.65 KM Plot
PCPG rs17587254 chr2:118841518 A/G 1.57E-5 178 25.28 26.62 11.65 KM Plot
PCPG rs17609957 chr17:50303110 C/G 3.24E-5 178 26.57 27.2 14.43 KM Plot
PCPG rs17615989 chr17:50303220 C/T 3.24E-5 178 26.57 27.2 14.43 KM Plot
PCPG rs17627102 chr12:21640214 T/G 2.39E-8 175 25.4 26.47 2.28 KM Plot
PCPG rs1764483 chr13:37613323 T/C 0.000294 178 4.17 24.7 25.7 KM Plot
PCPG rs1764484 chr13:37638050 C/T 0.000386 174 4.17 24.23 25.92 KM Plot
PCPG rs1764486 chr13:37639571 T/C 0.000355 176 4.17 24.23 25.92 KM Plot
PCPG rs1764487 chr13:37641131 T/C 0.000356 174 4.17 24.23 26.27 KM Plot
PCPG rs1764489 chr13:37655042 G/C 0.000305 177 4.17 24.23 25.87 KM Plot
PCPG rs1764490 chr13:37655029 T/G 0.000305 177 4.17 24.23 25.87 KM Plot
PCPG rs1764491 chr13:37654833 G/T 0.000287 178 4.17 24.23 25.92 KM Plot
PCPG rs1764492 chr13:37654704 C/A 0.000287 178 4.17 24.23 25.92 KM Plot
PCPG rs1764493 chr13:37654535 A/G 0.000287 178 25.92 24.23 4.17 KM Plot